Hi!
I’m Juexiao Zhou, Joshua Chou, 周觉晓
PhD student @KAUST.
Major in Computer Science and Bioinformatics.
Email: juexiao.zhou@kaust.edu.sa, juexiao.zhou@gmail.com
Wechat: JoshuaChou666
Office: Building 3, Level 4, Sea Side, 4216-WS23, KAUST
Affiliation:
Structural and Functional Bioinformatics (SFB) Group;
Computational Bioscience Research Center (CBRC)
King Abdullah University of Science and Technology (KAUST)
CV (last update: Jan 2022), Github, Linkedln, ORCID, Google Scholar
Education
- PhD Student in Computer Science, Supervised by Prof. Xin Gao, Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology, Dec 2021 - Present
- Master of Science, M.S. in Computer Science, Supervised by Prof. Xin Gao, Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology, Aug 2020 - Dec 2021
- Visiting Student, Supervised by Prof. Xin Gao, Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology, Sep 2019 - Feb 2020
- Bachelor of Science, B.S. (Honored) in Bioinformatics, Supervised by Prof. Wei Chen, Southern University of Science and Technology, Sep 2016 - Jun 2020
Research Interest
-
Privacy in Bioinformatics and Intelligent Healthcare
- Federated learning
- Differential privacy
- Homomorphic encryption
- Attacking and defense
-
AI in Medical Imaging
- EEG
- X-ray
- CT
- fMRI
-
Bioinformatics
- Analysis and integration of biological omics data with deep learning methods
- Developing new bioinformatics tools
-
Artificial Intelligence
- Theoretical Research of Deep Learning
-
Metaverse
- Computer vision and VR
-
Cognitive Neuroscience
- Mechanism of Language, Emotion, Memory, and Dream
- Brain-Computer Interface
Research and Publications
Please check the list @here
Working Experience
- Student Ambassador, CEMSE, King Abdullah University of Science and Technology, Dec 2021 - Present
Teaching Experience
-
CS220, Data Analytics, Fall 2022/2023, KAUST
- Cooperated with Prof. Xin Gao
- Position: Teaching Assistant
-
BioE 201/230 Foundations of Bioengineering, Fall 2022/2023, KAUST
- Cooperated with Prof. Xin Gao
- Position: Teaching Labs, Building 9 Room 4225
- Contents:
- Lab 1. Genome data analysis, 2022.08.30, colab
- Python basics
- D/RNA sequence analysis
- Biopython
- BLAST
- Reference genome
- Lab 2. Protein sequence analysis, 2022.09.06, colab
- Protein sequence analysis
- MSA
- PDB
- PyMOL
- Secondary structure prediction
- Lab 3. Proetin structure and function, 2022.09.13, colab
- Ab initio with PyRosetta
- AlphaFold2
- NucleicNet
- Docking with Smina
- Pfam annotation with deep learning
- Lab 1. Genome data analysis, 2022.08.30, colab
-
CS398 Graduate Seminar, Spring 2022, KAUST
- Cooperated with Prof. Dominik Michels
- Position: Teaching Assistant
Honours
King Abdullah University of Science and Technology
KAUST, 2021-Present
PhD, Computer Science
GPA: 4.00 / 4.00
- KAUST AII’s NeurIPS travel grant, 2022
- CEMSE Dean’s List Award, 2022
- Excellent Research Award, CEMSE, 2021
King Abdullah University of Science and Technology
KAUST, 2020-2021
Master of Science, Computer Science
GPA: 3.95 / 4.00
- Student ambassador, CEMSE, 2021
- Yearly best student award, CEMSE, 2021
- Full scholarship for MS/PhD study, 2020
Southern University of Science and Technology
SUSTech, 2016-2020
Bachelor of Science, Bioinformatics, Biology
GPA: 3.92 / 4.00 (Top 0.1%), Core GPA: 3.94/4.00
- Outstanding graduate of SUSTech, 2020.
- Cum Laude Graduate of the Department of Biology (Top 1/10), 2020.
- The Guinness world record for “the most vows received by a single civilized act activity”, 2019
- Candidate for 2019 National Scholarship, 2019
- Summer social practice excellent experience Award, 2018
- Excellent Student, The First Prize Scholarship, 2018
- Outstanding volunteer for the 12th CBIS Biennial Meeting, Shenzhen, China, 2018
- Candidate for 2018 National Scholarship, 2018
- Outstanding Volunteer of the 3rd Shenzhen International Life Science & Health Industry Summit (2016) Excellent Student, The First Prize Scholarship, 2017
- Dean scholarship, The First Prize Scholarship, 2017
- Excellent Student Cadre, 2017
- Outstanding Volunteer of 2017 Shenzhen International Precision Medicine Summit, 2017
- Alma mater practice excellent team, 2017
- National Literary Creation Award, 2016
- Excellent Student, The Second Prize Scholarship, 2016
Membership
- Chinese Association for Artificial Intelligence (CAAI) Member
- The international Asia-Pacific Bioinformatics Network (APBioNET) Member
Talks
-
Privacy in Bioinformatics and Intelligent Healthcare.
- Smart-Health Student Research Symposium, KAUST, Saudi Arabia, November 10, 2022.
-
PPML-Omics: a Privacy-Preserving federated Machine Learning system protects patients’ privacy from omic data
- CBRC Dual Seminar, King Abdullah University of Science and Technology, Saudi Arabia, March 29, 2022
-
PPML-Omics: a Privacy-Preserving federated Machine Learning system protects patients’ privacy from omic data
- BDAI重点实验室研究生沙龙第19期, 中国人民大学高瓴人工智能学院，中国北京，March 9, 2022
Academic Services
Reviewer
| Journal/Conference | # Paper Reviewed |
|---|---|
| Genome Biology | 1 |
| Genome Research | 2 |
| Heliyon | 1 |
| IJCAI-ECAI 2022 | 1 |
| ICONIP2020 | 1 |
| ICMLA2021 | 1 |
| Journal of Bioinformatics and Computational Biology | 1 |
| MICCAI2020 | 1 |
| Multimedia Systems | 1 |
| SIGKDD2022 | 2 |
Conference
- The 21st International Conference on Bioinformatics (InCoB2022), Administrator, certificate